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  5. Sacu_v1.1_s0124.g021622

Sacu_v1.1_s0124.g021622


Description : not classified & original description: CDS=1-420


Gene families : OG0001941 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001941_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0124.g021622

Target Alias Description ECC score Gene Family Method Actions
Aop_g25349 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g56839 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0027.g023662 No alias not classified & original description: CDS=24-455 0.04 OrthoFinder output from all 47 species
Msp_g03240 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g47460 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo438100 No alias No description available 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0004176 ATP-dependent peptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
MF GO:0008199 ferric iron binding IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
BP GO:0009439 cyanate metabolic process IEP HCCA
BP GO:0016226 iron-sulfur cluster assembly IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
BP GO:0031163 metallo-sulfur cluster assembly IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
InterPro domains Description Start Stop
IPR018392 LysM_dom 95 137
No external refs found!