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  5. Sacu_v1.1_s0124.g021604

Sacu_v1.1_s0124.g021604


Description : A1-class (Pepsin) protease & original description: CDS=61-1488


Gene families : OG0001117 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001117_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0124.g021604
Cluster HCCA: Cluster_50

Target Alias Description ECC score Gene Family Method Actions
Cba_g27163 No alias EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.02 OrthoFinder output from all 47 species
Ceric.04G074700.1 Ceric.04G074700 A1-class (Pepsin) protease & original description:... 0.04 OrthoFinder output from all 47 species
Dcu_g15153 No alias A1-class (Pepsin) protease & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g03398 No alias A1-class (Pepsin) protease & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os02g27360.1 LOC_Os02g27360 pepsin-type protease 0.02 OrthoFinder output from all 47 species
Len_g31561 No alias A1-class (Pepsin) protease & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g06221 No alias A1-class (Pepsin) protease & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g12606 No alias A1-class (Pepsin) protease & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000564 No alias A1-class (Pepsin) protease & original description: CDS=2095-3282 0.04 OrthoFinder output from all 47 species
Sam_g50845 No alias A1-class (Pepsin) protease & original description: none 0.03 OrthoFinder output from all 47 species
Solyc03g058400.4.1 Solyc03g058400 pepsin-type protease 0.03 OrthoFinder output from all 47 species
Zm00001e020541_P003 Zm00001e020541 pepsin-type protease 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0032392 DNA geometric change IEP HCCA
BP GO:0032508 DNA duplex unwinding IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
MF GO:0043015 gamma-tubulin binding IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR032861 TAXi_N 57 231
IPR032799 TAXi_C 252 376
No external refs found!