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  5. Sacu_v1.1_s0124.g021579

Sacu_v1.1_s0124.g021579


Description : not classified & original description: CDS=1-1125


Gene families : OG0002544 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002544_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0124.g021579

Target Alias Description ECC score Gene Family Method Actions
Adi_g086070 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g11263 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene57519.t1 Aspi01Gene57519 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g32646 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g06545 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g07443 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc10g074880.3.1 Solyc10g074880 Protein RETICULATA-RELATED 3, chloroplastic... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003779 actin binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004559 alpha-mannosidase activity IEP HCCA
MF GO:0004571 mannosyl-oligosaccharide 1,2-alpha-mannosidase activity IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
MF GO:0005516 calmodulin binding IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
MF GO:0015923 mannosidase activity IEP HCCA
MF GO:0015924 mannosyl-oligosaccharide mannosidase activity IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
MF GO:0051087 chaperone binding IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
InterPro domains Description Start Stop
IPR021825 RETICULATA-related 136 305
No external refs found!