Sacu_v1.1_s0122.g021475 (VAC1, ECB2, ATECB2)


Aliases : VAC1, ECB2, ATECB2

Description : not classified & original description: CDS=1-2172


Gene families : OG0000043 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0122.g021475

Target Alias Description ECC score Gene Family Method Actions
Adi_g024716 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g076943 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g11282 VAC1, ECB2, ATECB2 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g20579 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05715 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06166 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07076 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Als_g07473 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g07509 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18203 OTP82 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g19265 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g19286 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g30884 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g32527 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g27300 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g26474 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0004.g008664 No alias not classified & original description: CDS=1-3960 0.03 OrthoFinder output from all 47 species
Azfi_s0178.g056215 No alias not classified & original description: CDS=1-2514 0.03 OrthoFinder output from all 47 species
Azfi_s2487.g111794 No alias not classified & original description: CDS=200-2266 0.02 OrthoFinder output from all 47 species
Cba_g05221 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g05296 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g05328 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g06550 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07768 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g19906 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g29515 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g30014 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g34892 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g35103 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g67244 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67756 CRR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g67864 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g75131 CRR22 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.02G072000.1 Ceric.02G072000 not classified & original description: pacid=50584704... 0.02 OrthoFinder output from all 47 species
Ceric.05G023100.1 Ceric.05G023100 not classified & original description: pacid=50578135... 0.03 OrthoFinder output from all 47 species
Ceric.08G045700.1 Ceric.08G045700 not classified & original description: pacid=50638513... 0.02 OrthoFinder output from all 47 species
Ceric.16G006400.1 Ceric.16G006400 not classified & original description: pacid=50590241... 0.02 OrthoFinder output from all 47 species
Ceric.21G089400.1 Ceric.21G089400 not classified & original description: pacid=50603367... 0.02 OrthoFinder output from all 47 species
Ceric.31G051800.1 Ceric.31G051800 not classified & original description: pacid=50574746... 0.03 OrthoFinder output from all 47 species
Ceric.37G043200.1 Ceric.37G043200 not classified & original description: pacid=50616612... 0.01 OrthoFinder output from all 47 species
Dde_g16765 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g18170 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g26407 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g31748 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g23238 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g23534 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g47068 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g05663 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g13947 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g14118 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g35007 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g45899 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Nbi_g11632 DOT4 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g17001 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Nbi_g17427 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g18405 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Nbi_g25433 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Nbi_g30268 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g02291 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g29461 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g63518 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g03867 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ppi_g03887 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g09500 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g10292 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g15493 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g07064 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g12591 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g18164 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g27535 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g51748 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g09995 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Tin_g37478 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0003968 RNA-dependent RNA polymerase activity IEP HCCA
BP GO:0007186 G protein-coupled receptor signaling pathway IEP HCCA
MF GO:0015098 molybdate ion transmembrane transporter activity IEP HCCA
MF GO:0015103 inorganic anion transmembrane transporter activity IEP HCCA
BP GO:0015689 molybdate ion transport IEP HCCA
BP GO:0015698 inorganic anion transport IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0031683 G-protein beta/gamma-subunit complex binding IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
MF GO:0044877 protein-containing complex binding IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 471 498
IPR002885 Pentatricopeptide_repeat 135 181
IPR002885 Pentatricopeptide_repeat 351 397
IPR002885 Pentatricopeptide_repeat 236 282
IPR002885 Pentatricopeptide_repeat 568 616
No external refs found!