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  5. Sacu_v1.1_s0119.g021309

Sacu_v1.1_s0119.g021309


Description : not classified & original description: CDS=1-1485


Gene families : OG0002460 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002460_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0119.g021309
Cluster HCCA: Cluster_49

Target Alias Description ECC score Gene Family Method Actions
Adi_g019301 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g06020 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Aob_g20674 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g32731 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene24822.t1 Aspi01Gene24822 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g03177 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.12G031900.1 Ceric.12G031900 not classified & original description: pacid=50601347... 0.03 OrthoFinder output from all 47 species
Dcu_g49186 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g00713 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g01792 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g10334 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g56897 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g04565 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004568 chitinase activity IEP HCCA
BP GO:0006022 aminoglycan metabolic process IEP HCCA
BP GO:0006026 aminoglycan catabolic process IEP HCCA
BP GO:0006030 chitin metabolic process IEP HCCA
BP GO:0006032 chitin catabolic process IEP HCCA
BP GO:0006040 amino sugar metabolic process IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
BP GO:0016998 cell wall macromolecule catabolic process IEP HCCA
BP GO:0044036 cell wall macromolecule metabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0046348 amino sugar catabolic process IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
BP GO:1901071 glucosamine-containing compound metabolic process IEP HCCA
BP GO:1901072 glucosamine-containing compound catabolic process IEP HCCA
BP GO:1901136 carbohydrate derivative catabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!