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  5. Sacu_v1.1_s0113.g020822

Sacu_v1.1_s0113.g020822


Description : C2H2 subclass Di19 transcription factor & original description: CDS=532-1338


Gene families : OG0000852 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000852_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0113.g020822

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00058p00143100 evm_27.TU.AmTr_v1... Protein DEHYDRATION-INDUCED 19 homolog 4 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
AT3G05700 No alias Drought-responsive family protein 0.01 OrthoFinder output from all 47 species
Adi_g022193 HRB1 C2H2 subclass Di19 transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ala_g07606 HRB1 C2H2 subclass Di19 transcription factor & original... 0.02 OrthoFinder output from all 47 species
Als_g00511 HRB1 C2H2 subclass Di19 transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dac_g18120 No alias C2H2 subclass Di19 transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dcu_g25813 HRB1 C2H2 subclass Di19 transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dde_g05769 HRB1 C2H2 subclass Di19 transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ehy_g20619 No alias C2H2 subclass Di19 transcription factor & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01028066001 No alias No description available 0.01 OrthoFinder output from all 47 species
GSVIVT01028067001 No alias Protein DEHYDRATION-INDUCED 19 homolog 4 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01031200001 No alias Protein DEHYDRATION-INDUCED 19 homolog 3 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_18994 No alias Protein DEHYDRATION-INDUCED 19 homolog 2 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
LOC_Os05g48800.2 LOC_Os05g48800 Protein DEHYDRATION-INDUCED 19 OS=Oryza sativa subsp.... 0.04 OrthoFinder output from all 47 species
Lfl_g10230 No alias C2H2 subclass Di19 transcription factor & original... 0.03 OrthoFinder output from all 47 species
Pnu_g03044 No alias C2H2 subclass Di19 transcription factor & original... 0.02 OrthoFinder output from all 47 species
Pnu_g19368 No alias C2H2 subclass Di19 transcription factor & original... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0085.g018356 No alias C2H2 subclass Di19 transcription factor & original... 0.03 OrthoFinder output from all 47 species
Spa_g07297 HRB1 C2H2 subclass Di19 transcription factor & original... 0.03 OrthoFinder output from all 47 species
Zm00001e028035_P002 HRB1, Zm00001e028035 Protein DEHYDRATION-INDUCED 19 homolog 3 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005542 folic acid binding IEP HCCA
BP GO:0006275 regulation of DNA replication IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0008156 negative regulation of DNA replication IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0031324 negative regulation of cellular metabolic process IEP HCCA
MF GO:0031406 carboxylic acid binding IEP HCCA
MF GO:0033218 amide binding IEP HCCA
MF GO:0043177 organic acid binding IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0045005 DNA-templated DNA replication maintenance of fidelity IEP HCCA
BP GO:0045934 negative regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0048478 replication fork protection IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0048523 negative regulation of cellular process IEP HCCA
BP GO:0051052 regulation of DNA metabolic process IEP HCCA
BP GO:0051053 negative regulation of DNA metabolic process IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
BP GO:0051172 negative regulation of nitrogen compound metabolic process IEP HCCA
MF GO:0072341 modified amino acid binding IEP HCCA
BP GO:0090329 regulation of DNA-templated DNA replication IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140662 ATP-dependent protein folding chaperone IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:2000104 negative regulation of DNA-templated DNA replication IEP HCCA
InterPro domains Description Start Stop
IPR008598 Di19_Zn-bd 73 125
IPR027935 Di19_C 182 263
No external refs found!