Sacu_v1.1_s0112.g020790

Description : not classified & original description: CDS=1-1248

Gene families : OG0005709 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005709_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sacu_v1.1_s0112.g020790
Cluster	HCCA: Cluster_34

Target	Alias	Description	ECC score	Gene Family Method	Actions
Ceric.03G016600.1	Ceric.03G016600	not classified & original description: pacid=50572270...	0.03	OrthoFinder output from all 47 species
Ppi_g37366	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006396	RNA processing	None	Extended
BP	GO:0006399	tRNA metabolic process	None	Extended
BP	GO:0006400	tRNA modification	IEA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008033	tRNA processing	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009451	RNA modification	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016757	glycosyltransferase activity	None	Extended
MF	GO:0016763	pentosyltransferase activity	IEA	Interproscan
BP	GO:0034470	ncRNA processing	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034660	ncRNA metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0000413	protein peptidyl-prolyl isomerization	IEP	HCCA
MF	GO:0003676	nucleic acid binding	IEP	HCCA
MF	GO:0003723	RNA binding	IEP	HCCA
MF	GO:0003747	translation release factor activity	IEP	HCCA
CC	GO:0005667	transcription regulator complex	IEP	HCCA
CC	GO:0005778	peroxisomal membrane	IEP	HCCA
BP	GO:0006415	translational termination	IEP	HCCA
BP	GO:0007031	peroxisome organization	IEP	HCCA
MF	GO:0008079	translation termination factor activity	IEP	HCCA
BP	GO:0016043	cellular component organization	IEP	HCCA
BP	GO:0018208	peptidyl-proline modification	IEP	HCCA
MF	GO:0019843	rRNA binding	IEP	HCCA
BP	GO:0022411	cellular component disassembly	IEP	HCCA
CC	GO:0031903	microbody membrane	IEP	HCCA
BP	GO:0032984	protein-containing complex disassembly	IEP	HCCA
CC	GO:0042579	microbody	IEP	HCCA
BP	GO:0071840	cellular component organization or biogenesis	IEP	HCCA
CC	GO:0098588	bounding membrane of organelle	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002616	tRNA_ribo_trans-like	29	386

External Links

No external refs found!