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  5. Sacu_v1.1_s0109.g020564

Sacu_v1.1_s0109.g020564


Description : not classified & original description: CDS=1-2943


Gene families : OG0002719 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002719_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0109.g020564
Cluster HCCA: Cluster_33

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00190880 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
Aev_g15247 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g06078 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0060.g034750 No alias not classified & original description: CDS=32-3943 0.05 OrthoFinder output from all 47 species
Dcu_g04146 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g23055 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ehy_g30974 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_01281 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Lfl_g07443 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g37630 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g23730 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc09g031650.3.1 Solyc09g031650 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Spa_g55522 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g03800 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e020396_P001 Zm00001e020396 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e027931_P001 Zm00001e027931 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006366 transcription by RNA polymerase II IEP HCCA
BP GO:0006497 protein lipidation IEP HCCA
BP GO:0006505 GPI anchor metabolic process IEP HCCA
BP GO:0006506 GPI anchor biosynthetic process IEP HCCA
BP GO:0006643 membrane lipid metabolic process IEP HCCA
BP GO:0006644 phospholipid metabolic process IEP HCCA
BP GO:0006650 glycerophospholipid metabolic process IEP HCCA
BP GO:0006661 phosphatidylinositol biosynthetic process IEP HCCA
BP GO:0006664 glycolipid metabolic process IEP HCCA
BP GO:0008654 phospholipid biosynthetic process IEP HCCA
BP GO:0009247 glycolipid biosynthetic process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0045017 glycerolipid biosynthetic process IEP HCCA
BP GO:0046467 membrane lipid biosynthetic process IEP HCCA
BP GO:0046474 glycerophospholipid biosynthetic process IEP HCCA
BP GO:0046486 glycerolipid metabolic process IEP HCCA
BP GO:0046488 phosphatidylinositol metabolic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1903509 liposaccharide metabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!