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  5. Sacu_v1.1_s0108.g020449

Sacu_v1.1_s0108.g020449 (PME31, ATPME31)


Aliases : PME31, ATPME31

Description : pectin methylesterase & original description: CDS=560-1342


Gene families : OG0003622 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003622_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0108.g020449

Target Alias Description ECC score Gene Family Method Actions
Aop_g08106 PME31, ATPME31 EC_3.1 hydrolase acting on ester bond & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene10886.t1 PME31, ATPME31,... pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g11168 PME31, ATPME31 pectin methylesterase & original description: none 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0030599 pectinesterase activity IEA Interproscan
BP GO:0042545 cell wall modification IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEP HCCA
MF GO:0008107 galactoside 2-alpha-L-fucosyltransferase activity IEP HCCA
MF GO:0008417 fucosyltransferase activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0031127 alpha-(1,2)-fucosyltransferase activity IEP HCCA
BP GO:0042546 cell wall biogenesis IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
InterPro domains Description Start Stop
IPR000070 Pectinesterase_cat 5 141
No external refs found!