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  5. Sacu_v1.1_s0108.g020446

Sacu_v1.1_s0108.g020446 (GFA2)


Aliases : GFA2

Description : co-chaperone *(Hsp40) & original description: CDS=170-1507


Gene families : OG0001086 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001086_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0108.g020446

Target Alias Description ECC score Gene Family Method Actions
Adi_g059641 GFA2 co-chaperone *(Hsp40) & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0257.g060566 GFA2 not classified & original description: CDS=409-1596 0.04 OrthoFinder output from all 47 species
Cba_g13445 GFA2 co-chaperone *(Hsp40) & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g17310 GFA2 co-chaperone *(Hsp40) & original description: none 0.03 OrthoFinder output from all 47 species
Gb_35614 GFA2 co-chaperone (Hsp40) 0.02 OrthoFinder output from all 47 species
MA_63212g0020 ATJ1 Chaperone protein dnaJ 1, mitochondrial OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Nbi_g24757 GFA2 co-chaperone *(Hsp40) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g06878 GFA2 co-chaperone *(Hsp40) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g04488 GFA2 co-chaperone *(Hsp40) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g07130 GFA2 co-chaperone *(Hsp40) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0031072 heat shock protein binding IEA Interproscan
MF GO:0051082 unfolded protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003916 DNA topoisomerase activity IEP HCCA
MF GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006265 DNA topological change IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002939 DnaJ_C 196 411
IPR001305 HSP_DnaJ_Cys-rich_dom 223 283
IPR001623 DnaJ_domain 79 141
No external refs found!