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  5. Sacu_v1.1_s0107.g020301

Sacu_v1.1_s0107.g020301


Description : autophagosome cargo receptor protein *(NBR1) & original description: CDS=230-2257


Gene families : OG0000431 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000431_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0107.g020301

Target Alias Description ECC score Gene Family Method Actions
Adi_g083183 No alias autophagosome cargo receptor protein *(NBR1) & original... 0.02 OrthoFinder output from all 47 species
Als_g06325 No alias autophagosome cargo receptor protein *(NBR1) & original... 0.03 OrthoFinder output from all 47 species
Aob_g16986 No alias autophagosome cargo receptor protein *(NBR1) & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0009.g011922 No alias autophagosome cargo receptor protein *(NBR1) & original... 0.04 OrthoFinder output from all 47 species
Ceric.18G013100.1 Ceric.18G013100 autophagosome cargo receptor protein *(NBR1) & original... 0.04 OrthoFinder output from all 47 species
Dde_g12393 No alias autophagosome cargo receptor protein *(NBR1) & original... 0.02 OrthoFinder output from all 47 species
GSVIVT01007647001 No alias Vesicle trafficking.autophagosome formation.cargo... 0.03 OrthoFinder output from all 47 species
LOC_Os02g38050.1 LOC_Os02g38050 NBR1 autophagosome autophagic adapter protein 0.02 OrthoFinder output from all 47 species
Ore_g02792 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0001510 RNA methylation IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0004484 mRNA guanylyltransferase activity IEP HCCA
MF GO:0004721 phosphoprotein phosphatase activity IEP HCCA
BP GO:0005984 disaccharide metabolic process IEP HCCA
BP GO:0005991 trehalose metabolic process IEP HCCA
BP GO:0005992 trehalose biosynthetic process IEP HCCA
BP GO:0006370 7-methylguanosine mRNA capping IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008192 RNA guanylyltransferase activity IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
BP GO:0009312 oligosaccharide biosynthetic process IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
BP GO:0009452 7-methylguanosine RNA capping IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0016311 dephosphorylation IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
BP GO:0036260 RNA capping IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
BP GO:0046351 disaccharide biosynthetic process IEP HCCA
MF GO:0070568 guanylyltransferase activity IEP HCCA
InterPro domains Description Start Stop
IPR032350 N_BRCA1_central 324 424
IPR000433 Znf_ZZ 210 245
IPR000270 PB1_dom 4 73
No external refs found!