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  5. Sacu_v1.1_s0105.g020132

Sacu_v1.1_s0105.g020132


Description : not classified & original description: CDS=103-1611


Gene families : OG0007250 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007250_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0105.g020132

Target Alias Description ECC score Gene Family Method Actions
Aob_g02884 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g25294 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_478623g0010 No alias PsbP domain-containing protein 6, chloroplastic... 0.03 OrthoFinder output from all 47 species
Mp8g10770.1 No alias PsbP domain-containing protein 6, chloroplastic... 0.03 OrthoFinder output from all 47 species
Nbi_g07469 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g27494 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g65891 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g61363 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo144149 No alias PsbP domain-containing protein 6, chloroplastic... 0.02 OrthoFinder output from all 47 species
Zm00001e019532_P001 Zm00001e019532 PsbP domain-containing protein 6, chloroplastic... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
CC GO:0009523 photosystem II IEA Interproscan
CC GO:0009654 photosystem II oxygen evolving complex IEA Interproscan
BP GO:0015979 photosynthesis IEA Interproscan
CC GO:0019898 extrinsic component of membrane IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP HCCA
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0004097 catechol oxidase activity IEP HCCA
MF GO:0005381 iron ion transmembrane transporter activity IEP HCCA
BP GO:0006826 iron ion transport IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
MF GO:0008987 quinolinate synthetase A activity IEP HCCA
BP GO:0009435 NAD biosynthetic process IEP HCCA
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP HCCA
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
BP GO:0019359 nicotinamide nucleotide biosynthetic process IEP HCCA
BP GO:0019362 pyridine nucleotide metabolic process IEP HCCA
BP GO:0019363 pyridine nucleotide biosynthetic process IEP HCCA
BP GO:0019674 NAD metabolic process IEP HCCA
BP GO:0034755 iron ion transmembrane transport IEP HCCA
BP GO:0046496 nicotinamide nucleotide metabolic process IEP HCCA
MF GO:0046915 transition metal ion transmembrane transporter activity IEP HCCA
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP HCCA
BP GO:0072524 pyridine-containing compound metabolic process IEP HCCA
BP GO:0072525 pyridine-containing compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002683 PsbP_C 134 288
No external refs found!