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  5. Sacu_v1.1_s0104.g020087

Sacu_v1.1_s0104.g020087 (GAD4)


Aliases : GAD4

Description : glutamate decarboxylase *(GAD) & original description: CDS=254-1735


Gene families : OG0000690 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000690_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0104.g020087

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00024p00144920 GAD5,... Glutamate decarboxylase 5 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00024p00151670 GAD, GAD1,... Amino acid metabolism.biosynthesis.glutamate... 0.02 OrthoFinder output from all 47 species
AT2G02010 GAD4 glutamate decarboxylase 4 0.02 OrthoFinder output from all 47 species
AT5G17330 GAD, GAD1 glutamate decarboxylase 0.03 OrthoFinder output from all 47 species
Als_g01711 GAD, GAD1 glutamate decarboxylase *(GAD) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g10283 GAD, GAD1 glutamate decarboxylase *(GAD) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g38116 GAD, GAD1 glutamate decarboxylase *(GAD) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene12693.t1 GAD, GAD1,... glutamate decarboxylase *(GAD) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene69538.t1 GAD, GAD1,... glutamate decarboxylase *(GAD) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g48925 GAD, GAD1 glutamate decarboxylase *(GAD) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g10197 GAD, GAD1 glutamate decarboxylase *(GAD) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01011564001 GAD, GAD1 Amino acid metabolism.biosynthesis.glutamate... 0.02 OrthoFinder output from all 47 species
LOC_Os03g13300.1 GAD, GAD1, LOC_Os03g13300 glutamate decarboxylase 0.02 OrthoFinder output from all 47 species
LOC_Os03g51080.1 GAD, GAD1, LOC_Os03g51080 glutamate decarboxylase 0.04 OrthoFinder output from all 47 species
LOC_Os04g37460.1 GAD, GAD1, LOC_Os04g37460 glutamate decarboxylase 0.03 OrthoFinder output from all 47 species
LOC_Os08g36320.1 GAD, GAD1, LOC_Os08g36320 glutamate decarboxylase 0.02 OrthoFinder output from all 47 species
Nbi_g09361 GAD, GAD1 glutamate decarboxylase *(GAD) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g41329 GAD, GAD1 glutamate decarboxylase *(GAD) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g38409 GAD, GAD1 glutamate decarboxylase *(GAD) & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g10261 GAD, GAD1 glutamate decarboxylase *(GAD) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016830 carbon-carbon lyase activity IEA Interproscan
BP GO:0019752 carboxylic acid metabolic process IEA Interproscan
MF GO:0030170 pyridoxal phosphate binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEP HCCA
MF GO:0015299 obsolete solute:proton antiporter activity IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR002129 PyrdxlP-dep_de-COase 42 389
No external refs found!