Sacu_v1.1_s0103.g019976


Description : alpha-class expansin & original description: CDS=1-762


Gene families : OG0005965 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005965_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0103.g019976

Target Alias Description ECC score Gene Family Method Actions
Aev_g17360 No alias alpha-class expansin & original description: none 0.05 OrthoFinder output from all 47 species
Als_g49201 No alias alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g10060 No alias alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g67734 No alias alpha-class expansin & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g05196 No alias alpha-class expansin & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g23182 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g18772 ATEXPA1, EXP1,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g16880 No alias alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g43361 No alias alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g11608 No alias alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g27814 No alias alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g61538 No alias alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g51230 No alias alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e004712_P001 Zm00001e004712 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0015276 ligand-gated monoatomic ion channel activity IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0022834 ligand-gated channel activity IEP HCCA
MF GO:0022836 gated channel activity IEP HCCA
MF GO:0022839 monoatomic ion gated channel activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!