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  5. Sacu_v1.1_s0102.g019948

Sacu_v1.1_s0102.g019948 (TRXF2, ATF2)


Aliases : TRXF2, ATF2

Description : F-type thioredoxin *(Trx-F) & original description: CDS=729-1349


Gene families : OG0001099 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001099_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0102.g019948
Cluster HCCA: Cluster_5

Target Alias Description ECC score Gene Family Method Actions
Dcu_g01091 TRXF2, ATF2 F-type thioredoxin *(Trx-F) & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004190 aspartic-type endopeptidase activity IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0007034 vacuolar transport IEP HCCA
MF GO:0008081 phosphoric diester hydrolase activity IEP HCCA
BP GO:0016485 protein processing IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
MF GO:0070001 aspartic-type peptidase activity IEP HCCA
MF GO:0071949 FAD binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 116 162
IPR002885 Pentatricopeptide_repeat 90 109
IPR002885 Pentatricopeptide_repeat 15 42
IPR013766 Thioredoxin_domain 87 187
No external refs found!