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  5. Sacu_v1.1_s0102.g019871

Sacu_v1.1_s0102.g019871


Description : PLATZ-type transcription factor & original description: CDS=1-1125


Gene families : OG0000228 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000228_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0102.g019871

Target Alias Description ECC score Gene Family Method Actions
AT2G27930 No alias PLATZ transcription factor family protein 0.01 OrthoFinder output from all 47 species
Aspi01Gene32259.t1 Aspi01Gene32259 PLATZ-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene34065.t1 Aspi01Gene34065 PLATZ-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene52963.t1 Aspi01Gene52963 PLATZ-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g00770 No alias PLATZ-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0066.g016164 No alias PLATZ-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
CC GO:0031011 Ino80 complex IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
CC GO:0070603 SWI/SNF superfamily-type complex IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
CC GO:0097346 INO80-type complex IEP HCCA
CC GO:1904949 ATPase complex IEP HCCA
InterPro domains Description Start Stop
IPR006734 PLATZ 91 162
No external refs found!