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  5. Sacu_v1.1_s0101.g019760

Sacu_v1.1_s0101.g019760 (ABF2, ATAREB1, AREB1)


Aliases : ABF2, ATAREB1, AREB1

Description : bZIP class-A transcription factor & original description: CDS=1-846


Gene families : OG0000314 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000314_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0101.g019760
Cluster HCCA: Cluster_69

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00114p00031980 ABI5, GIA1,... RNA biosynthesis.transcriptional activation.bZIP... 0.03 OrthoFinder output from all 47 species
AMTR_s00152p00081700 FD-1, FD,... RNA biosynthesis.transcriptional activation.bZIP... 0.02 OrthoFinder output from all 47 species
AT2G41070 DPBF4, ATBZIP12, EEL Basic-leucine zipper (bZIP) transcription factor family protein 0.03 OrthoFinder output from all 47 species
Adi_g008679 ABF1 bZIP class-A transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0206.g057820 No alias not classified & original description: CDS=1-264 0.03 OrthoFinder output from all 47 species
Ceric.19G009600.1 ABF2, ATAREB1,... bZIP class-A transcription factor & original... 0.02 OrthoFinder output from all 47 species
Dac_g08207 ABF2, ATAREB1, AREB1 bZIP class-A transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os01g64000.1 ABI5, GIA1,... transcription factor (bZIP) 0.02 OrthoFinder output from all 47 species
LOC_Os02g52780.1 ABF2, ATAREB1,... transcription factor (bZIP) 0.02 OrthoFinder output from all 47 species
Ore_g18050 ABF2, ATAREB1, AREB1 bZIP class-A transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g26683 ABF2, ATAREB1, AREB1 bZIP class-A transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Pir_g07472 ABF2, ATAREB1, AREB1 bZIP class-A transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pp3c8_25350V3.1 Pp3c8_25350 abscisic acid responsive element-binding factor 1 0.01 OrthoFinder output from all 47 species
Sam_g19914 No alias bZIP class-A transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Solyc02g061990.3.1 ATBZIP27,... transcription factor (bZIP) 0.02 OrthoFinder output from all 47 species
Solyc09g009490.4.1 ABI5, GIA1,... transcription factor (bZIP) 0.04 OrthoFinder output from all 47 species
Tin_g07107 AREB2, ABF4 bZIP class-A transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e015956_P002 ABF2, ATAREB1,... transcription factor (bZIP) 0.03 OrthoFinder output from all 47 species
Zm00001e028693_P002 ABI5, GIA1,... transcription factor (bZIP) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!