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  5. Sacu_v1.1_s0100.g019703

Sacu_v1.1_s0100.g019703 (ATOFP6, OFP6)


Aliases : ATOFP6, OFP6

Description : transcriptional co-regulator *(OFP) & original description: CDS=1-2178


Gene families : OG0000209 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000209_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0100.g019703
Cluster HCCA: Cluster_15

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00078p00189070 OFP12, ATOFP12,... RNA biosynthesis.transcriptional activation.OFP... 0.03 OrthoFinder output from all 47 species
AT2G36050 ATOFP15, OFP15 ovate family protein 15 0.02 OrthoFinder output from all 47 species
AT4G14860 OFP11, atofp11 ovate family protein 11 0.02 OrthoFinder output from all 47 species
AT5G04820 ATOFP13, OFP13 ovate family protein 13 0.02 OrthoFinder output from all 47 species
AT5G58360 ATOFP3, OFP3 ovate family protein 3 0.03 OrthoFinder output from all 47 species
Aev_g34589 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g40609 OFP4, ATOFP4 transcriptional co-regulator *(OFP) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g39200 No alias transcriptional co-regulator *(OFP) & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene38723.t1 Aspi01Gene38723 transcriptional co-regulator *(OFP) & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g20215 ATOFP7, OFP7 transcriptional co-regulator *(OFP) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g54168 No alias transcriptional co-regulator *(OFP) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.18G010500.1 Ceric.18G010500 transcriptional co-regulator *(OFP) & original... 0.03 OrthoFinder output from all 47 species
Dcu_g01618 OFP4, ATOFP4 transcriptional co-regulator *(OFP) & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g36963 ATOFP6, OFP6 transcriptional co-regulator *(OFP) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g03668 OFP4, ATOFP4 transcriptional co-regulator *(OFP) & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os11g05780.1 LOC_Os11g05780 transcription factor (OFP) 0.02 OrthoFinder output from all 47 species
Mp3g18940.1 OFP8, ATOFP8 transcription factor (OFP) 0.02 OrthoFinder output from all 47 species
Nbi_g13520 No alias transcriptional co-regulator *(OFP) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc09g065350.1.1 Solyc09g065350 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e019825_P001 OFP2, ATOFP2,... transcription factor (OFP) 0.02 OrthoFinder output from all 47 species
Zm00001e032149_P001 OFP2, ATOFP2,... transcription factor (OFP) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004190 aspartic-type endopeptidase activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
MF GO:0070001 aspartic-type peptidase activity IEP HCCA
InterPro domains Description Start Stop
IPR006458 Ovate_C 666 722
No external refs found!