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  5. Sacu_v1.1_s0096.g019313

Sacu_v1.1_s0096.g019313 (CCB3, atylmg3, YLMG3)


Aliases : CCB3, atylmg3, YLMG3

Description : assembly factor CCB3 of CCB cytochrome b6 maturation system (system IV) & original description: CDS=1-618


Gene families : OG0006561 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006561_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0096.g019313
Cluster HCCA: Cluster_32

Target Alias Description ECC score Gene Family Method Actions
AT5G36120 CCB3, atylmg3, YLMG3 cofactor assembly, complex C (B6F) 0.03 OrthoFinder output from all 47 species
Ala_g14438 CCB3, atylmg3, YLMG3 assembly factor CCB3 of CCB cytochrome b6 maturation... 0.02 OrthoFinder output from all 47 species
Azfi_s0318.g064397 CCB3, atylmg3, YLMG3 assembly factor CCB3 of CCB cytochrome b6 maturation... 0.03 OrthoFinder output from all 47 species
Cba_g04968 CCB3, atylmg3, YLMG3 assembly factor CCB3 of CCB cytochrome b6 maturation... 0.03 OrthoFinder output from all 47 species
Ceric.13G022000.1 CCB3, atylmg3,... assembly factor CCB3 of CCB cytochrome b6 maturation... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020912.28 CCB3, atylmg3, YLMG3 Photosynthesis.photophosphorylation.cytochrome b6/f... 0.02 OrthoFinder output from all 47 species
Dcu_g02417 CCB3, atylmg3, YLMG3 assembly factor CCB3 of CCB cytochrome b6 maturation... 0.04 OrthoFinder output from all 47 species
Dde_g40122 CCB3, atylmg3, YLMG3 assembly factor CCB3 of CCB cytochrome b6 maturation... 0.02 OrthoFinder output from all 47 species
GSVIVT01010180001 CCB3, atylmg3, YLMG3 Photosynthesis.photophosphorylation.cytochrome b6/f... 0.03 OrthoFinder output from all 47 species
Len_g10269 CCB3, atylmg3, YLMG3 assembly factor CCB3 of CCB cytochrome b6 maturation... 0.04 OrthoFinder output from all 47 species
Msp_g29461 CCB3, atylmg3, YLMG3 assembly factor CCB3 of CCB cytochrome b6 maturation... 0.04 OrthoFinder output from all 47 species
Nbi_g04659 CCB3, atylmg3, YLMG3 assembly factor CCB3 of CCB cytochrome b6 maturation... 0.05 OrthoFinder output from all 47 species
Pir_g12781 CCB3, atylmg3, YLMG3 assembly factor CCB3 of CCB cytochrome b6 maturation... 0.04 OrthoFinder output from all 47 species
Spa_g17120 CCB3, atylmg3, YLMG3 assembly factor CCB3 of CCB cytochrome b6 maturation... 0.05 OrthoFinder output from all 47 species
Tin_g00420 CCB3, atylmg3, YLMG3 assembly factor CCB3 of CCB cytochrome b6 maturation... 0.03 OrthoFinder output from all 47 species
Zm00001e028271_P001 CCB3, atylmg3,... assembly factor CCB3 of CCB cytochrome b6 maturation... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006465 signal peptide processing IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0016485 protein processing IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
MF GO:0032977 membrane insertase activity IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
MF GO:0140104 molecular carrier activity IEP HCCA
MF GO:0140597 protein carrier chaperone IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR003425 CCB3/YggT 123 191
No external refs found!