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  5. Sacu_v1.1_s0092.g018883

Sacu_v1.1_s0092.g018883


Description : not classified & original description: CDS=196-1485


Gene families : OG0001946 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001946_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0092.g018883
Cluster HCCA: Cluster_41

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00077p00163180 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
Aspi01Gene50672.t1 Aspi01Gene50672 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.07G039400.1 Ceric.07G039400 not classified & original description: pacid=50626115... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000042.110 No alias No description available 0.01 OrthoFinder output from all 47 species
Len_g02782 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g15393 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g01789 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Mp3g20890.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g05984 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g05845 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g11875 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g38104 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc06g048520.3.1 Solyc06g048520 no hits & (original description: none) 0.1 OrthoFinder output from all 47 species
Zm00001e031365_P001 Zm00001e031365 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0005096 GTPase activator activity IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006835 dicarboxylic acid transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
MF GO:0008047 enzyme activator activity IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0015711 organic anion transport IEP HCCA
BP GO:0015740 C4-dicarboxylate transport IEP HCCA
BP GO:0015743 malate transport IEP HCCA
BP GO:0015849 organic acid transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030119 AP-type membrane coat adaptor complex IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030126 COPI vesicle coat IEP HCCA
CC GO:0030131 clathrin adaptor complex IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
MF GO:0030976 thiamine pyrophosphate binding IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0046942 carboxylic acid transport IEP HCCA
MF GO:0050997 quaternary ammonium group binding IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
MF GO:1901681 sulfur compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!