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  5. Sacu_v1.1_s0089.g018657

Sacu_v1.1_s0089.g018657


Description : EC_3.5 hydrolase acting on carbon-nitrogen bond, other than peptide bond & original description: CDS=46-1158


Gene families : OG0000959 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000959_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0089.g018657

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00077p00189080 evm_27.TU.AmTr_v1... Coenzyme metabolism.tetrahydrofolate... 0.02 OrthoFinder output from all 47 species
AT4G00620 No alias Amino acid dehydrogenase family protein 0.02 OrthoFinder output from all 47 species
Adi_g059537 No alias EC_3.5 hydrolase acting on carbon-nitrogen bond, other... 0.03 OrthoFinder output from all 47 species
Cre17.g698450 No alias Coenzyme metabolism.tetrahydrofolate... 0.02 OrthoFinder output from all 47 species
Pir_g07335 No alias EC_3.5 hydrolase acting on carbon-nitrogen bond, other... 0.02 OrthoFinder output from all 47 species
Solyc01g094280.3.1 Solyc01g094280 bifunctional 5,10-methylene-THF dehydrogenase and... 0.02 OrthoFinder output from all 47 species
Zm00001e025246_P001 Zm00001e025246 bifunctional 5,10-methylene-THF dehydrogenase and... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003729 mRNA binding IEP HCCA
MF GO:0005337 nucleoside transmembrane transporter activity IEP HCCA
CC GO:0005849 mRNA cleavage factor complex IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006378 mRNA polyadenylation IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
BP GO:0015858 nucleoside transport IEP HCCA
BP GO:0015931 nucleobase-containing compound transport IEP HCCA
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0016846 carbon-sulfur lyase activity IEP HCCA
BP GO:0031123 RNA 3'-end processing IEP HCCA
BP GO:0031124 mRNA 3'-end processing IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0043631 RNA polyadenylation IEP HCCA
MF GO:0044183 protein folding chaperone IEP HCCA
MF GO:0070403 NAD+ binding IEP HCCA
MF GO:0070567 cytidylyltransferase activity IEP HCCA
MF GO:0140662 ATP-dependent protein folding chaperone IEP HCCA
BP GO:1901264 carbohydrate derivative transport IEP HCCA
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP HCCA
BP GO:1901642 nucleoside transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR020630 THF_DH/CycHdrlase_cat_dom 89 204
IPR020631 THF_DH/CycHdrlase_NAD-bd_dom 207 373
No external refs found!