Sacu_v1.1_s0089.g018653

Description : subfamily ABCG transporter & original description: CDS=36-3518

Gene families : OG0001702 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001702_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sacu_v1.1_s0089.g018653

Target	Alias	Description	ECC score	Gene Family Method
AT2G37010	ATNAP12, NAP12	non-intrinsic ABC protein 12	0.02	OrthoFinder output from all 47 species
Aop_g29167	No alias	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Azfi_s0075.g037686	No alias	subfamily ABCG transporter & original description: CDS=355-3330	0.03	OrthoFinder output from all 47 species
Dac_g22739	No alias	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01025230001	No alias	Solute transport.primary active transport.ABC...	0.02	OrthoFinder output from all 47 species
LOC_Os10g30610.1	LOC_Os10g30610	subfamily ABCG transporter	0.04	OrthoFinder output from all 47 species
MA_10426482g0010	No alias	subfamily ABCG transporter	0.02	OrthoFinder output from all 47 species
Msp_g14714	No alias	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Msp_g25783	No alias	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g63521	No alias	subfamily ABCG transporter & original description: none	0.02	OrthoFinder output from all 47 species
Solyc09g008000.3.1	ATNAP12, NAP12,...	subfamily ABCG transporter	0.03	OrthoFinder output from all 47 species
Solyc11g069820.3.1	Solyc11g069820	subfamily ABCG transporter	0.02	OrthoFinder output from all 47 species
Tin_g02193	No alias	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0015399	primary active transmembrane transporter activity	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0140359	ABC-type transporter activity	IEA	Interproscan
MF	GO:0140657	ATP-dependent activity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003677	DNA binding	IEP	HCCA
MF	GO:0003682	chromatin binding	IEP	HCCA
MF	GO:0004611	phosphoenolpyruvate carboxykinase activity	IEP	HCCA
MF	GO:0004612	phosphoenolpyruvate carboxykinase (ATP) activity	IEP	HCCA
BP	GO:0005996	monosaccharide metabolic process	IEP	HCCA
BP	GO:0006006	glucose metabolic process	IEP	HCCA
BP	GO:0006094	gluconeogenesis	IEP	HCCA
MF	GO:0016829	lyase activity	IEP	HCCA
MF	GO:0016830	carbon-carbon lyase activity	IEP	HCCA
MF	GO:0016831	carboxy-lyase activity	IEP	HCCA
BP	GO:0019318	hexose metabolic process	IEP	HCCA
BP	GO:0019319	hexose biosynthetic process	IEP	HCCA
BP	GO:0030258	lipid modification	IEP	HCCA
BP	GO:0030259	lipid glycosylation	IEP	HCCA
BP	GO:0046364	monosaccharide biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR043926	ABCG_dom	767	1168
IPR003439	ABC_transporter-like_ATP-bd	587	738

External Links

No external refs found!