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Description : not classified & original description: CDS=1-1434
Gene families : OG0001550 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001550_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Sacu_v1.1_s0089.g018625 | |
| Cluster | HCCA: Cluster_21 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00017p00197580 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.C2H2 zinc... | 0.04 | OrthoFinder output from all 47 species | |
| AT1G11490 | No alias | zinc finger (C2H2 type) family protein | 0.03 | OrthoFinder output from all 47 species | |
| AT2G29660 | No alias | zinc finger (C2H2 type) family protein | 0.03 | OrthoFinder output from all 47 species | |
| AT4G27240 | No alias | zinc finger (C2H2 type) family protein | 0.03 | OrthoFinder output from all 47 species | |
| AT5G54630 | No alias | zinc finger protein-related | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene29956.t1 | Aspi01Gene29956 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene48763.t1 | Aspi01Gene48763 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene58391.t1 | Aspi01Gene58391 | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Azfi_s0032.g024887 | No alias | not classified & original description: CDS=136-1440 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0305.g063895 | No alias | not classified & original description: CDS=1048-1284 | 0.05 | OrthoFinder output from all 47 species | |
| Ehy_g13818 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g15575 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g18388 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01008925001 | No alias | RNA biosynthesis.transcriptional activation.C2H2 zinc... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01014576001 | No alias | RNA biosynthesis.transcriptional activation.C2H2 zinc... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01024778001 | No alias | RNA biosynthesis.transcriptional activation.C2H2 zinc... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_32332 | No alias | C2H2 zinc finger transcription factor | 0.04 | OrthoFinder output from all 47 species | |
| Gb_32897 | No alias | C2H2 zinc finger transcription factor | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os01g57650.1 | LOC_Os01g57650 | C2H2 zinc finger transcription factor | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os03g15790.1 | LOC_Os03g15790 | C2H2 zinc finger transcription factor | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os04g59380.1 | LOC_Os04g59380 | C2H2 zinc finger transcription factor | 0.04 | OrthoFinder output from all 47 species | |
| Len_g59194 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g14097 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| MA_10426153g0010 | No alias | C2H2 zinc finger transcription factor | 0.05 | OrthoFinder output from all 47 species | |
| MA_13576g0010 | No alias | C2H2 zinc finger transcription factor | 0.04 | OrthoFinder output from all 47 species | |
| MA_525155g0010 | No alias | C2H2 zinc finger transcription factor | 0.04 | OrthoFinder output from all 47 species | |
| MA_5608g0010 | No alias | C2H2 zinc finger transcription factor | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g13834 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Pnu_g16226 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g17139 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e008786_P002 | Zm00001e008786 | C2H2 zinc finger transcription factor | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e019606_P002 | Zm00001e019606 | C2H2 zinc finger transcription factor | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004180 | carboxypeptidase activity | IEP | HCCA |
| MF | GO:0004185 | serine-type carboxypeptidase activity | IEP | HCCA |
| MF | GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | IEP | HCCA |
| CC | GO:0005576 | extracellular region | IEP | HCCA |
| CC | GO:0005618 | cell wall | IEP | HCCA |
| BP | GO:0006073 | cellular glucan metabolic process | IEP | HCCA |
| MF | GO:0008238 | exopeptidase activity | IEP | HCCA |
| BP | GO:0009719 | response to endogenous stimulus | IEP | HCCA |
| BP | GO:0009725 | response to hormone | IEP | HCCA |
| BP | GO:0009733 | response to auxin | IEP | HCCA |
| BP | GO:0010033 | response to organic substance | IEP | HCCA |
| MF | GO:0016762 | xyloglucan:xyloglucosyl transferase activity | IEP | HCCA |
| MF | GO:0016798 | hydrolase activity, acting on glycosyl bonds | IEP | HCCA |
| CC | GO:0030312 | external encapsulating structure | IEP | HCCA |
| BP | GO:0042221 | response to chemical | IEP | HCCA |
| BP | GO:0044042 | glucan metabolic process | IEP | HCCA |
| BP | GO:0044264 | cellular polysaccharide metabolic process | IEP | HCCA |
| MF | GO:0046527 | glucosyltransferase activity | IEP | HCCA |
| CC | GO:0048046 | apoplast | IEP | HCCA |
| BP | GO:0050896 | response to stimulus | IEP | HCCA |
| MF | GO:0070008 | serine-type exopeptidase activity | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |