1. Home
  2. Species
  3. Salvinia cucullata
  4. Sequence
  5. Sacu_v1.1_s0086.g018439

Sacu_v1.1_s0086.g018439


Description : not classified & original description: CDS=214-771


Gene families : OG0001941 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001941_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0086.g018439
Cluster HCCA: Cluster_1

Target Alias Description ECC score Gene Family Method Actions
Adi_g012159 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g070397 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g13139 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g19707 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g02720 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g03240 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g07586 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g23369 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo443644 No alias No description available 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004455 ketol-acid reductoisomerase activity IEP HCCA
MF GO:0004779 sulfate adenylyltransferase activity IEP HCCA
MF GO:0004781 sulfate adenylyltransferase (ATP) activity IEP HCCA
CC GO:0005730 nucleolus IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
BP GO:0009081 branched-chain amino acid metabolic process IEP HCCA
BP GO:0009082 branched-chain amino acid biosynthetic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0070566 adenylyltransferase activity IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR018392 LysM_dom 141 183
No external refs found!