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  5. Sacu_v1.1_s0086.g018431

Sacu_v1.1_s0086.g018431 (POK, TTD8, ATVPS52)


Aliases : POK, TTD8, ATVPS52

Description : component *(VPS52/POK) of GARP/EARP (Golgi-/Endosome-Associated-Retrograde-Protein) complexes & original description: CDS=9-2297


Gene families : OG0004170 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004170_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0086.g018431

Target Alias Description ECC score Gene Family Method Actions
Adi_g114583 POK, TTD8, ATVPS52 component *(VPS52/POK) of GARP/EARP... 0.02 OrthoFinder output from all 47 species
Aob_g16191 POK, TTD8, ATVPS52 component *(VPS52/POK) of GARP/EARP... 0.02 OrthoFinder output from all 47 species
Ceric.05G039600.1 POK, TTD8,... component *(VPS52/POK) of GARP/EARP... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001003.6 POK, TTD8, ATVPS52 Vacuolar protein sorting-associated protein 52 A... 0.01 OrthoFinder output from all 47 species
Ehy_g03868 POK, TTD8, ATVPS52 component *(VPS52/POK) of GARP/EARP... 0.02 OrthoFinder output from all 47 species
Ore_g25434 POK, TTD8, ATVPS52 not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
CC GO:0005839 proteasome core complex IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP HCCA
BP GO:0019915 lipid storage IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0051235 maintenance of location IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
InterPro domains Description Start Stop
IPR007258 Vps52 145 643
No external refs found!