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  5. Sacu_v1.1_s0085.g018306

Sacu_v1.1_s0085.g018306


Description : not classified & original description: CDS=1-957


Gene families : OG0000248 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000248_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0085.g018306

Target Alias Description ECC score Gene Family Method Actions
Cba_g01948 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.19G057700.1 Ceric.19G057700 not classified & original description: pacid=50575152... 0.03 OrthoFinder output from all 47 species
Gb_08416 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os01g07570.1 LOC_Os01g07570 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os06g16640.1 LOC_Os06g16640 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os06g28000.1 LOC_Os06g28000 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os07g10530.1 LOC_Os07g10530 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Ppi_g02975 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g26281 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc05g005010.3.1 Solyc05g005010 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
CC GO:0005669 transcription factor TFIID complex IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
MF GO:0010181 FMN binding IEP HCCA
MF GO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity IEP HCCA
MF GO:0015020 glucuronosyltransferase activity IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
CC GO:0090575 RNA polymerase II transcription regulator complex IEP HCCA
InterPro domains Description Start Stop
IPR004314 Neprosin 100 311
No external refs found!