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  5. Sacu_v1.1_s0084.g018288

Sacu_v1.1_s0084.g018288 (CP5)


Aliases : CP5

Description : not classified & original description: CDS=420-1511


Gene families : OG0001352 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001352_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0084.g018288
Cluster HCCA: Cluster_32

Target Alias Description ECC score Gene Family Method Actions
Adi_g057006 CP5 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g15735 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g07930 CP5 not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os02g03230.1 CP5, LOC_Os02g03230 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Lfl_g15914 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g40855 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g51777 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g12706 CP5 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g05136 CP5 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e013516_P001 CP5, Zm00001e013516 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016160 amylase activity IEP HCCA
MF GO:0016161 beta-amylase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!