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  5. Sacu_v1.1_s0084.g018225

Sacu_v1.1_s0084.g018225 (CDC20.2)


Aliases : CDC20.2

Description : substrate specificity component *(CDC20) of APC/C E3 ubiquitin ligase complex & original description: CDS=330-1742


Gene families : OG0001302 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001302_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0084.g018225
Cluster HCCA: Cluster_48

Target Alias Description ECC score Gene Family Method Actions
Adi_g021516 CDC20.2 substrate specificity component *(CDC20) of APC/C E3... 0.02 OrthoFinder output from all 47 species
Aspi01Gene43580.t1 CDC20.1, Aspi01Gene43580 substrate specificity component *(CDC20) of APC/C E3... 0.03 OrthoFinder output from all 47 species
Gb_04004 CDC20.2 Cell division cycle 20.2, cofactor of APC complex... 0.02 OrthoFinder output from all 47 species
LOC_Os02g47180.2 CDC20.1, LOC_Os02g47180 CDC20-type (APC/C)-dependent ubiquitination activator protein 0.01 OrthoFinder output from all 47 species
Ppi_g02178 CDC20.1 substrate specificity component *(CDC20) of APC/C E3... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0010.g004643 CDC20.1 substrate specificity component *(CDC20) of APC/C E3... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0000287 magnesium ion binding IEP HCCA
CC GO:0000347 THO complex IEP HCCA
CC GO:0000445 THO complex part of transcription export complex IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003712 transcription coregulator activity IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006357 regulation of transcription by RNA polymerase II IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0030976 thiamine pyrophosphate binding IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
MF GO:0050997 quaternary ammonium group binding IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
MF GO:1901681 sulfur compound binding IEP HCCA
InterPro domains Description Start Stop
IPR024977 Apc4_WD40_dom 183 239
IPR001680 WD40_repeat 313 351
IPR001680 WD40_repeat 401 435
IPR001680 WD40_repeat 265 300
No external refs found!