Sacu_v1.1_s0083.g018193

Description : component *(uL24m) of large mitoribosomal-subunit proteome & original description: CDS=81-653

Gene families : OG0006883 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006883_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sacu_v1.1_s0083.g018193

Target	Alias	Description	ECC score	Gene Family Method	Actions
Dac_g42524	No alias	component *(uL24m) of large mitoribosomal-subunit...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000287	magnesium ion binding	IEP	HCCA
MF	GO:0003677	DNA binding	IEP	HCCA
MF	GO:0003916	DNA topoisomerase activity	IEP	HCCA
MF	GO:0003918	DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity	IEP	HCCA
CC	GO:0005739	mitochondrion	IEP	HCCA
BP	GO:0006265	DNA topological change	IEP	HCCA
BP	GO:0006400	tRNA modification	IEP	HCCA
BP	GO:0008033	tRNA processing	IEP	HCCA
MF	GO:0008192	RNA guanylyltransferase activity	IEP	HCCA
MF	GO:0008193	tRNA guanylyltransferase activity	IEP	HCCA
BP	GO:0009451	RNA modification	IEP	HCCA
BP	GO:0016043	cellular component organization	IEP	HCCA
BP	GO:0043933	protein-containing complex organization	IEP	HCCA
BP	GO:0051276	chromosome organization	IEP	HCCA
BP	GO:0065003	protein-containing complex assembly	IEP	HCCA
MF	GO:0070568	guanylyltransferase activity	IEP	HCCA
BP	GO:0071103	DNA conformation change	IEP	HCCA
BP	GO:0071840	cellular component organization or biogenesis	IEP	HCCA
BP	GO:0090304	nucleic acid metabolic process	IEP	HCCA
MF	GO:0140640	catalytic activity, acting on a nucleic acid	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR005824	KOW	17	48
IPR003256	Ribosomal_L24	68	133

External Links

No external refs found!

Sacu_v1.1_s0083.g018193

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation