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  5. Sacu_v1.1_s0082.g018102

Sacu_v1.1_s0082.g018102


Description : not classified & original description: CDS=1-1170


Gene families : OG0000047 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0082.g018102
Cluster HCCA: Cluster_50

Target Alias Description ECC score Gene Family Method Actions
Aop_g15118 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aop_g28645 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene30261.t1 Aspi01Gene30261 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0015.g014014 No alias not classified & original description: CDS=1-252 0.04 OrthoFinder output from all 47 species
Cba_g38575 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g76026 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dcu_g04172 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dcu_g39045 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ehy_g21748 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g01029 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g39511 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g18392 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0006.g003055 No alias not classified & original description: CDS=1-1290 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0120.g021379 No alias not classified & original description: CDS=1-252 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0194.g025437 No alias not classified & original description: CDS=1-876 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
CC GO:0005789 endoplasmic reticulum membrane IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
MF GO:0008107 galactoside 2-alpha-L-fucosyltransferase activity IEP HCCA
MF GO:0008417 fucosyltransferase activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
MF GO:0031127 alpha-(1,2)-fucosyltransferase activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0042546 cell wall biogenesis IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA

No InterPro domains available for this sequence

No external refs found!