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  5. Sacu_v1.1_s0080.g017964

Sacu_v1.1_s0080.g017964


Description : not classified & original description: CDS=489-3377


Gene families : OG0001929 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001929_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0080.g017964
Cluster HCCA: Cluster_24

Target Alias Description ECC score Gene Family Method Actions
Adi_g058373 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g15456 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g23877 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g30242 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g25451 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g32524 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc10g017790.1.1 Solyc10g017790 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005198 structural molecule activity IEP HCCA
MF GO:0005516 calmodulin binding IEP HCCA
CC GO:0005783 endoplasmic reticulum IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0008417 fucosyltransferase activity IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030118 clathrin coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030125 clathrin vesicle coat IEP HCCA
CC GO:0030126 COPI vesicle coat IEP HCCA
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP HCCA
CC GO:0030132 clathrin coat of coated pit IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
MF GO:0070403 NAD+ binding IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
InterPro domains Description Start Stop
IPR025486 DUF4378 860 956
IPR032795 DUF3741-assoc 102 124
IPR024975 NOV_C 155 243
No external refs found!