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  5. Sacu_v1.1_s0080.g017907

Sacu_v1.1_s0080.g017907


Description : light chain of Dynein microtubule-based motor protein complex & original description: CDS=1-417


Gene families : OG0000459 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000459_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0080.g017907
Cluster HCCA: Cluster_43

Target Alias Description ECC score Gene Family Method Actions
AT1G23220 No alias Dynein light chain type 1 family protein 0.04 OrthoFinder output from all 47 species
Aev_g07037 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g45425 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g18477 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene70313.t1 Aspi01Gene70313 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g33202 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g48500 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g01929 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g22084 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01014353001 No alias No description available 0.04 OrthoFinder output from all 47 species
Gb_22193 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os01g37490.1 LOC_Os01g37490 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os01g55510.1 LOC_Os01g55510 Dynein 8 kDa light chain, flagellar outer arm... 0.03 OrthoFinder output from all 47 species
Msp_g44978 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g29928 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g07930 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e014936_P001 Zm00001e014936 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e015738_P001 Zm00001e015738 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0007017 microtubule-based process IEA Interproscan
CC GO:0030286 dynein complex IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
InterPro domains Description Start Stop
IPR001372 Dynein_light_chain_typ-1/2 54 137
No external refs found!