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  5. Sacu_v1.1_s0079.g017804

Sacu_v1.1_s0079.g017804 (ICU2)


Aliases : ICU2

Description : catalytic component *(POLA1) of DNA polymerase alpha complex & original description: CDS=1-4734


Gene families : OG0005633 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005633_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0079.g017804

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000237.42 ICU2 Cell cycle.interphase.DNA replication.elongation.DNA... 0.02 OrthoFinder output from all 47 species
Cre04.g214350 ICU2 Cell cycle.interphase.DNA replication.elongation.DNA... 0.02 OrthoFinder output from all 47 species
LOC_Os01g64820.1 ICU2, LOC_Os01g64820 catalytic component POLA1 of DNA polymerase alpha complex 0.02 OrthoFinder output from all 47 species
Mp7g03960.1 ICU2 catalytic component POLA1 of DNA polymerase alpha complex 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEA Interproscan
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0003887 DNA-directed DNA polymerase activity IEA Interproscan
BP GO:0006260 DNA replication IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000776 kinetochore IEP HCCA
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0003896 DNA primase activity IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
BP GO:0006269 DNA replication, synthesis of RNA primer IEP HCCA
BP GO:0006952 defense response IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015297 antiporter activity IEP HCCA
CC GO:0031262 Ndc80 complex IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
MF GO:0042910 xenobiotic transmembrane transporter activity IEP HCCA
MF GO:0043015 gamma-tubulin binding IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
CC GO:0099080 supramolecular complex IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
InterPro domains Description Start Stop
IPR015088 Znf_DNA-dir_DNA_pol_B_alpha 1359 1572
IPR006133 DNA-dir_DNA_pol_B_exonuc 397 774
IPR024647 DNA_pol_a_cat_su_N 22 89
IPR006134 DNA-dir_DNA_pol_B_multi_dom 839 1319
No external refs found!