Sacu_v1.1_s0078.g017742


Description : not classified & original description: CDS=1-609


Gene families : OG0000398 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000398_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0078.g017742

Target Alias Description ECC score Gene Family Method Actions
Aop_g29592 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aop_g36383 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene02754.t1 Aspi01Gene02754 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g12603 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g16056 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g44130 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g48853 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g72426 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g29757 No alias lysine-rich arabinogalactan protein & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g43014 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Pir_g61568 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0020.g008219 No alias not classified & original description: CDS=48-314 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0027.g009659 No alias not classified & original description: CDS=1-201 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0027.g009660 No alias not classified & original description: CDS=2-256 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0031.g010538 No alias not classified & original description: CDS=1-471 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0042.g012646 No alias not classified & original description: CDS=1-300 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0051.g013963 No alias not classified & original description: CDS=1-459 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0098.g019469 No alias not classified & original description: CDS=1-738 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0122.g021465 No alias not classified & original description: CDS=1-630 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0163.g024030 No alias not classified & original description: CDS=1-405 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0167.g024225 No alias not classified & original description: CDS=1-729 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0243.g026658 No alias not classified & original description: CDS=1-393 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003887 DNA-directed DNA polymerase activity IEP HCCA
MF GO:0003989 acetyl-CoA carboxylase activity IEP HCCA
MF GO:0004345 glucose-6-phosphate dehydrogenase activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005996 monosaccharide metabolic process IEP HCCA
BP GO:0006006 glucose metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
CC GO:0009317 acetyl-CoA carboxylase complex IEP HCCA
MF GO:0016421 CoA carboxylase activity IEP HCCA
MF GO:0016743 carboxyl- or carbamoyltransferase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0016885 ligase activity, forming carbon-carbon bonds IEP HCCA
BP GO:0019318 hexose metabolic process IEP HCCA
MF GO:0034061 DNA polymerase activity IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
MF GO:0050661 NADP binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!