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  5. Sacu_v1.1_s0077.g017592

Sacu_v1.1_s0077.g017592 (PRA1.B3)


Aliases : PRA1.B3

Description : B-G-class Rab-GDF protein & original description: CDS=1-558


Gene families : OG0000542 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000542_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0077.g017592

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00265420 PRA1.F3, PRA8,... Vesicle trafficking.regulation of membrane tethering and... 0.04 OrthoFinder output from all 47 species
AT1G17700 PRA1.F1 prenylated RAB acceptor 1.F1 0.03 OrthoFinder output from all 47 species
AT3G13720 PRA1.F3, PRA8 PRA1 (Prenylated rab acceptor) family protein 0.03 OrthoFinder output from all 47 species
AT5G07110 PRA1.B6 prenylated RAB acceptor 1.B6 0.04 OrthoFinder output from all 47 species
Aop_g00225 PRA1.B5 B-G-class Rab-GDF protein & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g01011 PRA1.B1 B-G-class Rab-GDF protein & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene11339.t1 PRA1.B5, Aspi01Gene11339 B-G-class Rab-GDF protein & original description: none 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020961.80 No alias No description available 0.01 OrthoFinder output from all 47 species
Dac_g08868 PRA1.B1 B-G-class Rab-GDF protein & original description: none 0.03 OrthoFinder output from all 47 species
Gb_35591 No alias B-G-class Rab-GDF protein 0.03 OrthoFinder output from all 47 species
Len_g00355 PRA1.B5 B-G-class Rab-GDF protein & original description: none 0.05 OrthoFinder output from all 47 species
Len_g13013 PRA1.B4 B-G-class Rab-GDF protein & original description: none 0.03 OrthoFinder output from all 47 species
MA_10434486g0010 PRA7, PRA1.F2 B-G-class Rab-GDF protein 0.02 OrthoFinder output from all 47 species
Mp1g23710.1 PRA1.B4 B-G-class Rab-GDF protein 0.02 OrthoFinder output from all 47 species
Msp_g08254 PRA1.B5 B-G-class Rab-GDF protein & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g06102 PRA1.B1 B-G-class Rab-GDF protein & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g11811 No alias B-G-class Rab-GDF protein & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g11088 PRA1.B1 B-G-class Rab-GDF protein & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g40186 PRA1.B2 B-G-class Rab-GDF protein & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g40187 PRA1.B1 B-G-class Rab-GDF protein & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e023951_P001 PRA1.B2, Zm00001e023951 B-G-class Rab-GDF protein 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP HCCA
BP GO:0000097 sulfur amino acid biosynthetic process IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003871 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity IEP HCCA
MF GO:0004107 chorismate synthase activity IEP HCCA
MF GO:0004312 fatty acid synthase activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004521 endoribonuclease activity IEP HCCA
MF GO:0004525 ribonuclease III activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006555 methionine metabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0008172 S-methyltransferase activity IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0009066 aspartate family amino acid metabolic process IEP HCCA
BP GO:0009067 aspartate family amino acid biosynthetic process IEP HCCA
BP GO:0009072 aromatic amino acid metabolic process IEP HCCA
BP GO:0009073 aromatic amino acid family biosynthetic process IEP HCCA
BP GO:0009086 methionine biosynthetic process IEP HCCA
MF GO:0009922 fatty acid elongase activity IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP HCCA
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP HCCA
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP HCCA
MF GO:0042085 5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044272 sulfur compound biosynthetic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR004895 Prenylated_rab_accept_PRA1 39 176
No external refs found!