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  5. Sacu_v1.1_s0076.g017539

Sacu_v1.1_s0076.g017539


Description : not classified & original description: CDS=110-1120


Gene families : OG0002270 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002270_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0076.g017539
Cluster HCCA: Cluster_41

Target Alias Description ECC score Gene Family Method Actions
Adi_g010350 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.35G060300.1 Ceric.35G060300 not classified & original description: pacid=50581369... 0.06 OrthoFinder output from all 47 species
Ehy_g14684 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01038568001 No alias No description available 0.03 OrthoFinder output from all 47 species
Gb_31873 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os09g19890.1 LOC_Os09g19890 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Msp_g02055 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g13793 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g18107 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e009737_P001 Zm00001e009737 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005096 GTPase activator activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006810 transport IEP HCCA
MF GO:0008047 enzyme activator activity IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030126 COPI vesicle coat IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
MF GO:0044183 protein folding chaperone IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
MF GO:0140662 ATP-dependent protein folding chaperone IEP HCCA

No InterPro domains available for this sequence

No external refs found!