Sacu_v1.1_s0074.g017242 (ATVIIIA, VIIIA)


Aliases : ATVIIIA, VIIIA

Description : not classified & original description: CDS=216-3518


Gene families : OG0000203 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000203_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0074.g017242

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00027850 ATVIIIA, VIIIA,... Cytoskeleton.microfilament network.myosin... 0.02 OrthoFinder output from all 47 species
Adi_g089073 ATVIIIA, VIIIA not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g18391 ATMYA1, XI-1, MYA1 class XI myosin microfilament-based motor protein &... 0.04 OrthoFinder output from all 47 species
Aspi01Gene01435.t2 ATXIK, XI-17,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g12479 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dac_g23473 ATMYA1, XI-1, MYA1 class XI myosin microfilament-based motor protein &... 0.02 OrthoFinder output from all 47 species
Dac_g25362 ATXIK, XI-17, XIK not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g19234 ATXIK, XI-17, XIK class XI myosin microfilament-based motor protein &... 0.04 OrthoFinder output from all 47 species
GSVIVT01005233001 XIA, ATXIA Myosin-6 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
GSVIVT01006004001 XIF, ATMYO5, ATXIF Cytoskeleton.microfilament network.myosin... 0.03 OrthoFinder output from all 47 species
Len_g29954 XI-15, ATXI-I, XI-I class XI myosin microfilament-based motor protein &... 0.04 OrthoFinder output from all 47 species
Msp_g31802 ATVIIIA, VIIIA not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g09070 ATXIK, XI-17, XIK class XI myosin microfilament-based motor protein &... 0.02 OrthoFinder output from all 47 species
Nbi_g20512 ATXIK, XI-17, XIK class XI myosin microfilament-based motor protein &... 0.03 OrthoFinder output from all 47 species
Sam_g18055 No alias class XI myosin microfilament-based motor protein &... 0.04 OrthoFinder output from all 47 species
Solyc06g083960.3.1 XIC, ATXIC,... class XI myosin microfilament-based motor protein 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003774 cytoskeletal motor activity IEA Interproscan
MF GO:0005515 protein binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016459 myosin complex IEA Interproscan
Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP HCCA
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP HCCA
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP HCCA
BP GO:0006284 base-excision repair IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0032392 DNA geometric change IEP HCCA
BP GO:0032508 DNA duplex unwinding IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
InterPro domains Description Start Stop
IPR001609 Myosin_head_motor_dom 198 794
IPR000048 IQ_motif_EF-hand-BS 834 852
No external refs found!