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  5. Sacu_v1.1_s0073.g017048

Sacu_v1.1_s0073.g017048


Description : not classified & original description: CDS=50-1423


Gene families : OG0002549 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002549_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0073.g017048
Cluster HCCA: Cluster_45

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00046p00227230 evm_27.TU.AmTr_v1... Uncharacterized protein At4g37920 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Adi_g024425 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g00921 No alias regulatory factor *(RP8) of RNA polymerase RpoA activity... 0.02 OrthoFinder output from all 47 species
Dde_g24389 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01003846001 No alias Uncharacterized protein At4g37920 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
LOC_Os01g20110.1 LOC_Os01g20110 Uncharacterized protein At4g37920 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Mp6g13740.1 No alias Uncharacterized protein At4g37920 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Nbi_g10310 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g12165 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g04497 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g46357 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e029280_P001 Zm00001e029280 Uncharacterized protein At4g37920 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000902 cell morphogenesis IEP HCCA
MF GO:0003725 double-stranded RNA binding IEP HCCA
MF GO:0004827 proline-tRNA ligase activity IEP HCCA
BP GO:0006066 alcohol metabolic process IEP HCCA
BP GO:0006433 prolyl-tRNA aminoacylation IEP HCCA
BP GO:0006729 tetrahydrobiopterin biosynthetic process IEP HCCA
MF GO:0008124 4-alpha-hydroxytetrahydrobiopterin dehydratase activity IEP HCCA
BP GO:0009653 anatomical structure morphogenesis IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
BP GO:0019751 polyol metabolic process IEP HCCA
BP GO:0032502 developmental process IEP HCCA
BP GO:0034311 diol metabolic process IEP HCCA
BP GO:0034312 diol biosynthetic process IEP HCCA
BP GO:0042558 pteridine-containing compound metabolic process IEP HCCA
BP GO:0042559 pteridine-containing compound biosynthetic process IEP HCCA
BP GO:0046146 tetrahydrobiopterin metabolic process IEP HCCA
BP GO:0046165 alcohol biosynthetic process IEP HCCA
BP GO:0046173 polyol biosynthetic process IEP HCCA
BP GO:1901615 organic hydroxy compound metabolic process IEP HCCA
BP GO:1901617 organic hydroxy compound biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!