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  5. Sacu_v1.1_s0073.g017023

Sacu_v1.1_s0073.g017023 (GDH1)


Aliases : GDH1

Description : EC_1.4 oxidoreductase acting on CH-NH2 group of donor & original description: CDS=1056-4496


Gene families : OG0000985 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000985_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0073.g017023

Target Alias Description ECC score Gene Family Method Actions
AT5G07440 GDH2 glutamate dehydrogenase 2 0.03 OrthoFinder output from all 47 species
Aev_g45491 GDH3 glutamate dehydrogenase & original description: none 0.02 OrthoFinder output from all 47 species
Als_g37054 GDH1 EC_1.4 oxidoreductase acting on CH-NH2 group of donor &... 0.02 OrthoFinder output from all 47 species
Aob_g08368 GDH1 EC_1.4 oxidoreductase acting on CH-NH2 group of donor &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene17309.t1 GDH1, Aspi01Gene17309 EC_1.4 oxidoreductase acting on CH-NH2 group of donor &... 0.04 OrthoFinder output from all 47 species
Azfi_s0060.g034810 GDH1 EC_1.4 oxidoreductase acting on CH-NH2 group of donor &... 0.03 OrthoFinder output from all 47 species
GSVIVT01024481001 GDH2 Nutrient uptake.nitrogen assimilation.glutamate... 0.01 OrthoFinder output from all 47 species
Gb_27370 GDH1 glutamate dehydrogenase 0.02 OrthoFinder output from all 47 species
MA_95356g0010 GDH1 glutamate dehydrogenase 0.02 OrthoFinder output from all 47 species
Ore_g03137 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo270327 GDH1 Nutrient uptake.nitrogen assimilation.glutamate... 0.02 OrthoFinder output from all 47 species
Solyc03g094010.3.1 GDH2, Solyc03g094010 glutamate dehydrogenase 0.01 OrthoFinder output from all 47 species
Spa_g17139 GDH1 EC_1.4 oxidoreductase acting on CH-NH2 group of donor &... 0.03 OrthoFinder output from all 47 species
Spa_g40017 GDH1 EC_1.4 oxidoreductase acting on CH-NH2 group of donor &... 0.03 OrthoFinder output from all 47 species
Zm00001e005964_P003 GDH1, Zm00001e005964 glutamate dehydrogenase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006520 amino acid metabolic process IEA Interproscan
MF GO:0016491 oxidoreductase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004650 polygalacturonase activity IEP HCCA
BP GO:0006650 glycerophospholipid metabolic process IEP HCCA
BP GO:0007034 vacuolar transport IEP HCCA
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP HCCA
MF GO:0016409 palmitoyltransferase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
MF GO:0032182 ubiquitin-like protein binding IEP HCCA
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
MF GO:0043130 ubiquitin binding IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
BP GO:0046486 glycerolipid metabolic process IEP HCCA
BP GO:0046488 phosphatidylinositol metabolic process IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 871 917
IPR002885 Pentatricopeptide_repeat 768 815
IPR002885 Pentatricopeptide_repeat 973 1020
IPR002885 Pentatricopeptide_repeat 563 610
IPR002885 Pentatricopeptide_repeat 665 712
IPR006097 Glu/Leu/Phe/Val/Trp_DH_dimer 33 159
IPR002885 Pentatricopeptide_repeat 845 867
IPR002885 Pentatricopeptide_repeat 742 764
IPR002885 Pentatricopeptide_repeat 640 663
IPR006096 Glu/Leu/Phe/Val/Trp_DH_C 176 404
No external refs found!