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  5. Sacu_v1.1_s0071.g016878

Sacu_v1.1_s0071.g016878 (ATGCN4, GCN4)


Aliases : ATGCN4, GCN4

Description : EC_3.2 glycosylase & original description: CDS=1-4257


Gene families : OG0004763 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004763_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0071.g016878

Target Alias Description ECC score Gene Family Method Actions
Aev_g02475 ATGCN4, GCN4 )regulatory protein *(GCN4) of RIN4 activity & original... 0.03 OrthoFinder output from all 47 species
Aob_g02204 ATGCN4, GCN4 )regulatory protein *(GCN4) of RIN4 activity & original... 0.03 OrthoFinder output from all 47 species
Cre01.g034950 ATGCN4, GCN4 ABC transporter F family member 4 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016161 beta-amylase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0004470 malic enzyme activity IEP HCCA
MF GO:0004471 malate dehydrogenase (decarboxylating) (NAD+) activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005787 signal peptidase complex IEP HCCA
BP GO:0006465 signal peptide processing IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
BP GO:0016485 protein processing IEP HCCA
MF GO:0016615 malate dehydrogenase activity IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP HCCA
MF GO:0019239 deaminase activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
MF GO:0031267 small GTPase binding IEP HCCA
MF GO:0051020 GTPase binding IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP HCCA
CC GO:1905368 peptidase complex IEP HCCA
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 871 1042
IPR008540 BES1_N 40 192
IPR003439 ABC_transporter-like_ATP-bd 1208 1343
IPR001554 Glyco_hydro_14 234 653
No external refs found!