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  5. Sacu_v1.1_s0069.g016598

Sacu_v1.1_s0069.g016598


Description : germ cell differentiation factor *(RKD) & original description: CDS=169-1800


Gene families : OG0000385 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000385_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0069.g016598

Target Alias Description ECC score Gene Family Method Actions
Adi_g019526 No alias SMARCF component *(LFR) of SWI/SNF chromatin remodeling... 0.03 OrthoFinder output from all 47 species
Als_g06352 No alias germ cell differentiation factor *(RKD) & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene27306.t1 Aspi01Gene27306 germ cell differentiation factor *(RKD) & original... 0.03 OrthoFinder output from all 47 species
Ceric.24G073100.1 Ceric.24G073100 germ cell differentiation factor *(RKD) & original... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000441.19 No alias No description available 0.01 OrthoFinder output from all 47 species
Ore_g29160 No alias germ cell differentiation factor *(RKD) & original... 0.01 OrthoFinder output from all 47 species
Spa_g40016 No alias germ cell differentiation factor *(RKD) & original... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
InterPro domains Description Start Stop
IPR003035 RWP-RK_dom 388 435
No external refs found!