Description : heavy chain of clathrin triskelion & original description: CDS=216-4583
Gene families : OG0002108 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002108_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Sacu_v1.1_s0069.g016537 | |
Cluster | HCCA: Cluster_24 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00007p00168430 | No alias | Vesicle trafficking.clathrin coated vesicle (CCV)... | 0.03 | OrthoFinder output from all 47 species | |
MA_47260g0010 | No alias | Clathrin heavy chain 2 OS=Oryza sativa subsp. japonica... | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005198 | structural molecule activity | IEA | Interproscan |
BP | GO:0006886 | intracellular protein transport | IEA | Interproscan |
BP | GO:0016192 | vesicle-mediated transport | IEA | Interproscan |
CC | GO:0030130 | clathrin coat of trans-Golgi network vesicle | IEA | Interproscan |
CC | GO:0030132 | clathrin coat of coated pit | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005516 | calmodulin binding | IEP | HCCA |
CC | GO:0005783 | endoplasmic reticulum | IEP | HCCA |
BP | GO:0006457 | protein folding | IEP | HCCA |
BP | GO:0006486 | protein glycosylation | IEP | HCCA |
MF | GO:0008417 | fucosyltransferase activity | IEP | HCCA |
CC | GO:0030126 | COPI vesicle coat | IEP | HCCA |
MF | GO:0043167 | ion binding | IEP | HCCA |
MF | GO:0043169 | cation binding | IEP | HCCA |
BP | GO:0043413 | macromolecule glycosylation | IEP | HCCA |
MF | GO:0046872 | metal ion binding | IEP | HCCA |
MF | GO:0051082 | unfolded protein binding | IEP | HCCA |
BP | GO:0070085 | glycosylation | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR022365 | Clathrin_H-chain_propeller_rpt | 156 | 197 |
IPR022365 | Clathrin_H-chain_propeller_rpt | 22 | 55 |
IPR015348 | Clathrin_H-chain_linker_core | 281 | 304 |
IPR000547 | Clathrin_H-chain/VPS_repeat | 744 | 881 |
IPR000547 | Clathrin_H-chain/VPS_repeat | 1040 | 1182 |
IPR000547 | Clathrin_H-chain/VPS_repeat | 895 | 1032 |
IPR000547 | Clathrin_H-chain/VPS_repeat | 1188 | 1330 |
IPR000547 | Clathrin_H-chain/VPS_repeat | 545 | 683 |
No external refs found! |