Sacu_v1.1_s0068.g016438 (bZIP16, AtbZIP16)

Aliases : bZIP16, AtbZIP16

Description : bZIP class-G transcription factor & original description: CDS=242-1513

Gene families : OG0000424 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000424_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sacu_v1.1_s0068.g016438

Target	Alias	Description	ECC score	Gene Family Method
Aop_g09577	bZIP16, AtbZIP16	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Cba_g16030	bZIP68, AtbZIP68	bZIP class-G transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
LOC_Os02g03580.1	bZIP68,...	transcription factor (bZIP)	0.02	OrthoFinder output from all 47 species
Pnu_g25109	bZIP16, AtbZIP16	bZIP class-G transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Solyc02g085610.4.1	GBF1, Solyc02g085610	transcription factor (bZIP)	0.04	OrthoFinder output from all 47 species
Solyc08g076100.4.1	bZIP16,...	transcription factor (bZIP)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000049	tRNA binding	IEP	HCCA
BP	GO:0002097	tRNA wobble base modification	IEP	HCCA
BP	GO:0002098	tRNA wobble uridine modification	IEP	HCCA
MF	GO:0003676	nucleic acid binding	IEP	HCCA
MF	GO:0003723	RNA binding	IEP	HCCA
MF	GO:0003729	mRNA binding	IEP	HCCA
MF	GO:0003916	DNA topoisomerase activity	IEP	HCCA
MF	GO:0004540	ribonuclease activity	IEP	HCCA
MF	GO:0004650	polygalacturonase activity	IEP	HCCA
MF	GO:0004788	thiamine diphosphokinase activity	IEP	HCCA
MF	GO:0005488	binding	IEP	HCCA
BP	GO:0006139	nucleobase-containing compound metabolic process	IEP	HCCA
BP	GO:0006265	DNA topological change	IEP	HCCA
BP	GO:0006396	RNA processing	IEP	HCCA
BP	GO:0006400	tRNA modification	IEP	HCCA
BP	GO:0006725	cellular aromatic compound metabolic process	IEP	HCCA
BP	GO:0006766	vitamin metabolic process	IEP	HCCA
BP	GO:0006767	water-soluble vitamin metabolic process	IEP	HCCA
BP	GO:0006996	organelle organization	IEP	HCCA
BP	GO:0008033	tRNA processing	IEP	HCCA
BP	GO:0009110	vitamin biosynthetic process	IEP	HCCA
BP	GO:0009229	thiamine diphosphate biosynthetic process	IEP	HCCA
BP	GO:0016043	cellular component organization	IEP	HCCA
MF	GO:0016778	diphosphotransferase activity	IEP	HCCA
MF	GO:0030975	thiamine binding	IEP	HCCA
BP	GO:0034227	tRNA thio-modification	IEP	HCCA
BP	GO:0034641	cellular nitrogen compound metabolic process	IEP	HCCA
CC	GO:0035145	exon-exon junction complex	IEP	HCCA
BP	GO:0042255	ribosome assembly	IEP	HCCA
BP	GO:0042256	cytosolic ribosome assembly	IEP	HCCA
BP	GO:0042357	thiamine diphosphate metabolic process	IEP	HCCA
BP	GO:0042364	water-soluble vitamin biosynthetic process	IEP	HCCA
BP	GO:0042723	thiamine-containing compound metabolic process	IEP	HCCA
BP	GO:0042724	thiamine-containing compound biosynthetic process	IEP	HCCA
MF	GO:0043021	ribonucleoprotein complex binding	IEP	HCCA
MF	GO:0043022	ribosome binding	IEP	HCCA
MF	GO:0043178	alcohol binding	IEP	HCCA
BP	GO:0044272	sulfur compound biosynthetic process	IEP	HCCA
MF	GO:0044877	protein-containing complex binding	IEP	HCCA
BP	GO:0046483	heterocycle metabolic process	IEP	HCCA
BP	GO:0051276	chromosome organization	IEP	HCCA
BP	GO:0070925	organelle assembly	IEP	HCCA
BP	GO:0071103	DNA conformation change	IEP	HCCA
BP	GO:0071840	cellular component organization or biogenesis	IEP	HCCA
BP	GO:0072527	pyrimidine-containing compound metabolic process	IEP	HCCA
BP	GO:0072528	pyrimidine-containing compound biosynthetic process	IEP	HCCA
BP	GO:0090304	nucleic acid metabolic process	IEP	HCCA
MF	GO:0097159	organic cyclic compound binding	IEP	HCCA
BP	GO:0140694	non-membrane-bounded organelle assembly	IEP	HCCA
BP	GO:1901360	organic cyclic compound metabolic process	IEP	HCCA
MF	GO:1901363	heterocyclic compound binding	IEP	HCCA
MF	GO:1901681	sulfur compound binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR004827	bZIP	375	443
IPR012900	MFMR	81	176

External Links

No external refs found!

Sacu_v1.1_s0068.g016438 (bZIP16, AtbZIP16)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation