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  5. Sacu_v1.1_s0065.g016040

Sacu_v1.1_s0065.g016040 (LIL3:1)


Aliases : LIL3:1

Description : LHCII-stabilizing factor *(SEP3) & original description: CDS=241-1047


Gene families : OG0002922 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002922_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0065.g016040
Cluster HCCA: Cluster_32

Target Alias Description ECC score Gene Family Method Actions
Adi_g020993 LIL3:1 LHCII-stabilizing factor *(SEP3) & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g15592 LIL3:1 LHCII-stabilizing factor *(SEP3) & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0002.g001642 LIL3:1 LHCII-stabilizing factor *(SEP3) & original description:... 0.04 OrthoFinder output from all 47 species
Cre03.g199535 LIL3:1 Photosynthesis.photophosphorylation.photosystem... 0.04 OrthoFinder output from all 47 species
Dac_g00494 LIL3:1 LHCII-stabilizing factor *(SEP3) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01003693001 LIL3:1 Photosynthesis.photophosphorylation.photosystem... 0.02 OrthoFinder output from all 47 species
MA_10427346g0010 LIL3:1 SEP3 LHC-related protein 0.03 OrthoFinder output from all 47 species
Mp1g17030.1 LIL3:1 SEP3 LHC-related protein 0.04 OrthoFinder output from all 47 species
Nbi_g08279 LIL3:1 LHCII-stabilizing factor *(SEP3) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g08395 LIL3:1 LHCII-stabilizing factor *(SEP3) & original description: none 0.01 OrthoFinder output from all 47 species
Ore_g28824 LIL3:1 LHCII-stabilizing factor *(SEP3) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g17000 LIL3:1 LHCII-stabilizing factor *(SEP3) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g32170 LIL3:1 LHCII-stabilizing factor *(SEP3) & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP HCCA
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0004019 adenylosuccinate synthase activity IEP HCCA
MF GO:0004325 ferrochelatase activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006605 protein targeting IEP HCCA
BP GO:0006612 protein targeting to membrane IEP HCCA
BP GO:0006613 cotranslational protein targeting to membrane IEP HCCA
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP HCCA
BP GO:0006778 porphyrin-containing compound metabolic process IEP HCCA
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP HCCA
BP GO:0006783 heme biosynthetic process IEP HCCA
MF GO:0008113 peptide-methionine (S)-S-oxide reductase activity IEP HCCA
MF GO:0008134 transcription factor binding IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
CC GO:0009507 chloroplast IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009536 plastid IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0017025 TBP-class protein binding IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0042168 heme metabolic process IEP HCCA
BP GO:0042440 pigment metabolic process IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0045047 protein targeting to ER IEP HCCA
BP GO:0046148 pigment biosynthetic process IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
BP GO:0051668 localization within membrane IEP HCCA
BP GO:0070972 protein localization to endoplasmic reticulum IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP HCCA
BP GO:0072657 protein localization to membrane IEP HCCA
BP GO:0090150 establishment of protein localization to membrane IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140296 general transcription initiation factor binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!