1. Home
  2. Species
  3. Salvinia cucullata
  4. Sequence
  5. Sacu_v1.1_s0064.g015846

Sacu_v1.1_s0064.g015846


Description : bHLH-type transcription factor & original description: CDS=545-1615


Gene families : OG0000267 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000267_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0064.g015846
Cluster HCCA: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
Adi_g106592 AMS bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g113443 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g33809 ATBHLH029,... bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20772 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g50660 AMS bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.01G041100.1 Ceric.01G041100 bHLH-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Ehy_g19595 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os04g23550.1 LOC_Os04g23550 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
LOC_Os07g36460.1 DYT1, LOC_Os07g36460 transcription factor (bHLH) 0.01 OrthoFinder output from all 47 species
Len_g33865 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Mp2g07150.1 No alias transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Pnu_g06362 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g06042 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g16653 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g29801 ATBHLH029,... bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000159 protein phosphatase type 2A complex IEP HCCA
MF GO:0004474 malate synthase activity IEP HCCA
CC GO:0005875 microtubule associated complex IEP HCCA
BP GO:0006081 cellular aldehyde metabolic process IEP HCCA
BP GO:0006097 glyoxylate cycle IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0007034 vacuolar transport IEP HCCA
CC GO:0008287 protein serine/threonine phosphatase complex IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009733 response to auxin IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP HCCA
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP HCCA
MF GO:0019208 phosphatase regulator activity IEP HCCA
MF GO:0019888 protein phosphatase regulator activity IEP HCCA
CC GO:0030286 dynein complex IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
BP GO:0046487 glyoxylate metabolic process IEP HCCA
MF GO:0046912 acyltransferase activity, acyl groups converted into alkyl on transfer IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1903293 phosphatase complex IEP HCCA
InterPro domains Description Start Stop
IPR011598 bHLH_dom 239 282
No external refs found!