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  5. Sacu_v1.1_s0062.g015451

Sacu_v1.1_s0062.g015451 (SYP21, ATSYP21,...)


Aliases : SYP21, ATSYP21, PEP12, ATPEP12, PEP12P

Description : Qa-type SYP2-group component of SNARE membrane fusion complex & original description: CDS=1-792


Gene families : OG0001469 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001469_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0062.g015451
Cluster HCCA: Cluster_35

Target Alias Description ECC score Gene Family Method Actions
Adi_g018611 SYP21, ATSYP21,... Qa-type SYP2-group component of SNARE membrane fusion... 0.02 OrthoFinder output from all 47 species
LOC_Os01g15110.1 SYP21, ATSYP21,... SYP2-group Qa-type SNARE component 0.05 OrthoFinder output from all 47 species
Len_g15100 SYP21, ATSYP21,... Qa-type SYP2-group component of SNARE membrane fusion... 0.03 OrthoFinder output from all 47 species
Spa_g00651 SYP21, ATSYP21,... Qa-type SYP2-group component of SNARE membrane fusion... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEP HCCA
CC GO:0005747 mitochondrial respiratory chain complex I IEP HCCA
BP GO:0006605 protein targeting IEP HCCA
BP GO:0006612 protein targeting to membrane IEP HCCA
BP GO:0006613 cotranslational protein targeting to membrane IEP HCCA
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0006835 dicarboxylic acid transport IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008312 7S RNA binding IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015297 antiporter activity IEP HCCA
MF GO:0015299 obsolete solute:proton antiporter activity IEP HCCA
BP GO:0015711 organic anion transport IEP HCCA
BP GO:0015740 C4-dicarboxylate transport IEP HCCA
BP GO:0015743 malate transport IEP HCCA
BP GO:0015849 organic acid transport IEP HCCA
MF GO:0016854 racemase and epimerase activity IEP HCCA
MF GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
BP GO:0022900 electron transport chain IEP HCCA
CC GO:0030964 NADH dehydrogenase complex IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
MF GO:0042910 xenobiotic transmembrane transporter activity IEP HCCA
BP GO:0045047 protein targeting to ER IEP HCCA
CC GO:0045271 respiratory chain complex I IEP HCCA
BP GO:0046942 carboxylic acid transport IEP HCCA
CC GO:0048500 signal recognition particle IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051668 localization within membrane IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0070972 protein localization to endoplasmic reticulum IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP HCCA
BP GO:0072657 protein localization to membrane IEP HCCA
BP GO:0090150 establishment of protein localization to membrane IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0098798 mitochondrial protein-containing complex IEP HCCA
CC GO:0098800 inner mitochondrial membrane protein complex IEP HCCA
CC GO:0098803 respiratory chain complex IEP HCCA
CC GO:1902495 transmembrane transporter complex IEP HCCA
BP GO:1902600 proton transmembrane transport IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
CC GO:1990351 transporter complex IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR006011 Syntaxin_N 173 205
IPR006011 Syntaxin_N 29 110
IPR000727 T_SNARE_dom 207 258
No external refs found!