Sacu_v1.1_s0058.g014923


Description : RKD-type transcription factor & original description: CDS=1173-2381


Gene families : OG0000385 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000385_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0058.g014923

Target Alias Description ECC score Gene Family Method Actions
Adi_g019525 No alias SMARCF component *(LFR) of SWI/SNF chromatin remodeling... 0.03 OrthoFinder output from all 47 species
Azfi_s0003.g007535 No alias germ cell differentiation factor *(RKD) & original... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000388.18 No alias RNA biosynthesis.transcriptional activation.NIN-like... 0.01 OrthoFinder output from all 47 species
Ore_g29160 No alias germ cell differentiation factor *(RKD) & original... 0.01 OrthoFinder output from all 47 species
Solyc12g011190.2.1 Solyc12g011190 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004408 holocytochrome-c synthase activity IEP HCCA
MF GO:0004594 pantothenate kinase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005739 mitochondrion IEP HCCA
CC GO:0005789 endoplasmic reticulum membrane IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009260 ribonucleotide biosynthetic process IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015293 symporter activity IEP HCCA
BP GO:0015936 coenzyme A metabolic process IEP HCCA
BP GO:0015937 coenzyme A biosynthetic process IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016846 carbon-sulfur lyase activity IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
BP GO:0033865 nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0033866 nucleoside bisphosphate biosynthetic process IEP HCCA
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034030 ribonucleoside bisphosphate biosynthetic process IEP HCCA
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034033 purine nucleoside bisphosphate biosynthetic process IEP HCCA
BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA

No InterPro domains available for this sequence

No external refs found!