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  5. Sacu_v1.1_s0055.g014468

Sacu_v1.1_s0055.g014468


Description : lipid-A-disaccharide synthase *(LpxB) & original description: CDS=1-1392


Gene families : OG0007399 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007399_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0055.g014468
Cluster HCCA: Cluster_29

Target Alias Description ECC score Gene Family Method Actions
Sam_g29419 No alias lipid-A-disaccharide synthase *(LpxB) & original... 0.02 OrthoFinder output from all 47 species
Solyc07g049740.4.1 Solyc07g049740 lipid-A-disaccharide synthase (LpxB) 0.04 OrthoFinder output from all 47 species
Tin_g10328 No alias lipid-A-disaccharide synthase *(LpxB) & original... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008915 lipid-A-disaccharide synthase activity IEA Interproscan
BP GO:0009245 lipid A biosynthetic process IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
BP GO:0006606 protein import into nucleus IEP HCCA
BP GO:0006913 nucleocytoplasmic transport IEP HCCA
BP GO:0006952 defense response IEP HCCA
MF GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0019829 ATPase-coupled monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0022853 active monoatomic ion transmembrane transporter activity IEP HCCA
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
BP GO:0034504 protein localization to nucleus IEP HCCA
MF GO:0042625 ATPase-coupled ion transmembrane transporter activity IEP HCCA
MF GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism IEP HCCA
MF GO:0046961 proton-transporting ATPase activity, rotational mechanism IEP HCCA
BP GO:0051169 nuclear transport IEP HCCA
BP GO:0051170 import into nucleus IEP HCCA
MF GO:0061608 nuclear import signal receptor activity IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
MF GO:0140104 molecular carrier activity IEP HCCA
MF GO:0140142 nucleocytoplasmic carrier activity IEP HCCA
BP GO:1902600 proton transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR003835 Glyco_trans_19 275 443
IPR003835 Glyco_trans_19 37 224
No external refs found!