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  5. Sacu_v1.1_s0054.g014234

Sacu_v1.1_s0054.g014234


Description : not classified & original description: CDS=48-500


Gene families : OG0002266 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002266_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0054.g014234

Target Alias Description ECC score Gene Family Method Actions
Adi_g051773 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g09982 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g05116 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0008.g011248 No alias not classified & original description: CDS=350-739 0.02 OrthoFinder output from all 47 species
Cba_g49722 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.02G031600.1 Ceric.02G031600 not classified & original description: pacid=50584332... 0.03 OrthoFinder output from all 47 species
Lfl_g29829 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g33291 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g13308 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo228155 No alias No description available 0.04 OrthoFinder output from all 47 species
Tin_g24498 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004420 hydroxymethylglutaryl-CoA reductase (NADPH) activity IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
BP GO:0015936 coenzyme A metabolic process IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
BP GO:0033865 nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP HCCA
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP HCCA
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP HCCA

No InterPro domains available for this sequence

No external refs found!