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  5. Sacu_v1.1_s0047.g013507

Sacu_v1.1_s0047.g013507 (PHV, ATHB9)


Aliases : PHV, ATHB9

Description : not classified & original description: CDS=1-966


Gene families : OG0000446 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000446_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0047.g013507
Cluster HCCA: Cluster_18

Target Alias Description ECC score Gene Family Method Actions
AT4G32880 HB-8, ATHB8, ATHB-8 homeobox gene 8 0.02 OrthoFinder output from all 47 species
Aob_g26987 ICU4, ATHB15,... HD-ZIP III-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g11576 ICU4, ATHB15,... HD-ZIP III-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g07882 ICU4, ATHB15,... HD-ZIP III-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os01g10320.1 ICU4, ATHB15,... transcription factor (HD-ZIP III) 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0015.g006545 No alias not classified & original description: CDS=1-333 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0015.g006550 PHB-1D, ATHB-14,... transcriptional co-regulator *(ZPR) & original... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001356 Homeobox_dom 165 223
No external refs found!